NFDI4BIOIMAGE
Source: /files/meta/Used_Ontologies_at_NFDI.xlsx (sheet: NFDI4BIOIMAGE)
| Ontology ID | Domain | License | Modularity | Format | developed / reused / only indexed / only evaluated | Used in |
|---|---|---|---|---|---|---|
| CHEBI | Molecular entities of biological interest | CC BY 4.0 | owl | reused | ||
| EFO | Experimental variables | Apache license 2.0 | ORDO, MONDO, CHEBI, GO, NCBITAXON, DC, NCIT, HP, FMA, OIO, OWL, UBERON, RO, PR, FBBT, OBI, OBA, IAO, SKOS, SO, BAO, DCTERMS, CLO, HANCESTRO, OGMS, PO, IDO, ZFA, RDFS, TO, CL, PATO, MPATH, DOID, FBDV, BFO, BTO, MA, MP, OMIT, UO, WBLS | owl | reused | https://idr.openmicroscopy.org/about/linked-resources.html |
| QUDT | Scientific units | CC BY 4.0 | OBO_mappable | owl | reused | OME-XML |
| EDAM | Life-sciences & data management | CC BY 4.0 | OBO_mappable | owl | reused | REMBI |
| BIOSCHEMA | Biology, Chemistry | CC BY 4.0 | SCHEMA_aligned | rdf | reused | OME-Zarr |
| SNOMED CT | Medizin allgemein | Proprietary | rf2 | reused | https://idr.openmicroscopy.org/about/linked-resources.html | |
| CMPO | reused | |||||
| Ensembl | reused | |||||
| FBbi | reused | |||||
| NCBI Gene | reused | |||||
| NCBI Taxonomy | reused | |||||
| PubChem | reused | |||||
| UniProt | reused |